GO Annotations consist of four mandatory components: a gene product, a term from one of
the three Gene Ontology (GO) controlled vocabularies (Molecular Function, Biological
Process, and Cellular Component), a reference, and an evidence code.
SGD has manually curated and high-throughput GO Annotations, both derived from the
literature, as well as computational, or predicted, annotations.
Summary
Chromatin-binding RNA polymerase II transcription initiation factor involved in assembly of preinitiation complex; subunit of transcription factor TFIID
0 GO Terms curated.
GO Slim Terms
The yeast GO Slim terms are higher level terms that best represent the major S. cerevisiae biological
processes, functions, and cellular components. The GO Slim terms listed here are the broader parent
terms for the specific terms to which this gene product is annotated, and thus represent the more
general processes, functions, and components in which it is involved.
Manually curated GO annotations reflect our best
understanding of the basic molecular
function, biological process, and
cellular component for this gene product.
Manually curated annotations are assigned by SGD curators based on published papers when
available, or by curatorial statements if necessary. Curators periodically review all
manually curated GO annotations for accuracy and completeness.
There are no manually curated annotations
for TAF2.
Biological Process
Increase the total number of rows showing on this page using the pull-down located below the table, or use the page
scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header
to sort by that column; filter the table using the "Filter" box at the top of the table.
Increase the total number of rows showing on this page using the pull-down located below the table, or use the page
scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header
to sort by that column; filter the table using the "Filter" box at the top of the table.
Increase the total number of rows showing on this page using the pull-down located below the table, or use the page
scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header
to sort by that column; filter the table using the "Filter" box at the top of the table.
GO annotations from high-throughput experiments are
based on a variety of large scale high-throughput experiments, including
genome-wide experiments. Many of these annotations are made based on GO annotations (or
mappings to GO annotations) assigned by the authors, rather than SGD curators. While SGD
curators read these publications and often work closely with authors to incorporate the
information, each individual annotation may not necessarily be reviewed by a curator. GO
annotations from high-throughput experiments will be assigned only when this type of
data is available, and thus may not be assigned to terms from all three controlled
vocabularies of the Gene Ontology.
There are no high-throughput annotations
for TAF2.
Biological Process
Increase the total number of rows showing on this page using the pull-down located below the table, or use the page
scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header
to sort by that column; filter the table using the "Filter" box at the top of the table.
Increase the total number of rows showing on this page using the pull-down located below the table, or use the page
scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header
to sort by that column; filter the table using the "Filter" box at the top of the table.
Increase the total number of rows showing on this page using the pull-down located below the table, or use the page
scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header
to sort by that column; filter the table using the "Filter" box at the top of the table.
Computational GO Annotations are
predictions. These annotations are NOT reviewed by a curator. Currently, all
computational GO annotations for S. cerevisiae are assigned by an external
source (for example, the Gene Ontology Annotation
(GOA) project of the European Bioinformatics
Institute (EBI)).
There are no computational annotations
for TAF2.
Biological Process
Increase the total number of rows showing on this page using the pull-down located below the table, or use the page
scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header
to sort by that column; filter the table using the "Filter" box at the top of the table.
Increase the total number of rows showing on this page using the pull-down located below the table, or use the page
scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header
to sort by that column; filter the table using the "Filter" box at the top of the table.
Increase the total number of rows showing on this page using the pull-down located below the table, or use the page
scroll at the table's top right to browse through the table's pages; use the arrows to the right of a column header
to sort by that column; filter the table using the "Filter" box at the top of the table.
This diagram displays manually curated and high-throughput GO terms (green squares) that are shared between the given gene (yellow circle) and other genes (gray
circles) based on the number of GO terms shared (adjustable using the slider at the bottom).
Click on a gene or Biological Process GO term name to go to its specific page within SGD; drag any of the gene or GO
term name objects around within the visualization for easier viewing; click “Reset” to automatically redraw the
diagram; filter the genes that share GO Biological Process terms with the given gene by the number of terms they
share by clicking anywhere on the slider bar or dragging the tab to the desired filter number.