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UVic top 45 plasma 2008 (Letarte)
ATAQS T-47D cell line
Human prostate serum SRM (Cima et al.)
Human urine SRM (Selevsek et al.)
Human CAP depleted plasma (Huettenhain et al.)
Human CAP crude plasma (Huettenhain et al.)
Human CAP urine (Huettenhain et al.)
Mouse plasma QSRM (Whiteaker et al.)
Mouse plasma SISCAPA (Whiteaker et al.)
Bovine mastitis host-repsonse (Bislev et al.)
M. tuberculosis SRM atlas (Schubert et al.)
Label-free quantification of Leptospira (Ludwig et al.)
Human liver HALT-C (Qin et al.)
Dynamic Msn2 phosphorylation changes in yeast (Sunnaker, et al.)
Yeast phospho site changes in Pda1 Pfk2 Gpd1 (Oliveira, et al.)
Human CAP ovarian cancer plasma (Huettenhain et al.)
dMRM four human chr18 proteins in liver & plasma
RIPchipSRM C. elegans miR58 targets (Jovanovic, et al.)
Regulation of DosR regulon (Schubert)
Human Chr18. 25 synthetic peptides for 21 proteins (Zgoda, et al.)
Human Chr18. 25 light, 17 heavy synth peps for 21 prots (Zgoda, et al.)
Human Chr18. 25 light endogenous peps for 21 prots (Zgoda, et al.)
Human Chr18. 23 light endogenous peps for 19 prots (Zgoda, et al.)
KLK assay for PCa plasma samples (Nilsson, et al.)
pre-60S particles at different maturation stages (Altvater, et al.)
Quantification of human nuclear pore complex composition in five cell lines (Ori, et al.)
Quantif. nucleoporins in HeLa nuclear env. extracts (Ori, et al.)
Variation across lineages of M. tuberculosis (N. Kruh-Garcia)
Quantitative microdissected breast cancer analysis (Liu, et al.)
Changes in mouse pathways after high-fat diet (Sabido, et al.)
Rice embryogenesis proteins quantification (Zi)
SRM-analysis of Podospora anserina mitochondria (Plohnke)
Biomarker discovery for lung nodules
Investigation of proximal phosphorylation and lysine acetylation crosstalk
MRM qualifcation of serum protein biomarkers for brucellosis treatment
Quantification of ErbB network proteins in three cell types, TSQ
Quantification of ErbB network proteins in three cell types, 5500 QTRAP
MRM Verification of serum protein biomarkers for brucellosis treatment
MRM dataset of 185 one hit wonders in human liver
MRM qualification of serum proteinMRM qualification of serum protein biomarkers differentially expressed in Active Tuberculosis in HIV- and HIV+ Individuals (South Africa center)
MRM verification of serum protein biomarkers differentially expressed in Active Tuberculosis in HIV- and HIV+ Individuals (All centers - part 2)
MRM verification of plasma/serum protein biomarkers for progression from MTB infection to disease
MRM qualification of plasma/serum protein biomarkers for progression from MTB infection to disease
MRM Qualification of Biomarkers of Immunogenicity and Response Prediction of Influenza A H5N1 Vaccine
MRM Qualification of Biomarkers of Immunogenicity and Response Prediction of Influenza A H1N1 Vaccine
MRM qualifcation of secreted proteins in Brucella-infected/non-infected trophoblast cell lines
MRM qualification of serum protein biomarkers differentially expressed in Active Tuberculosis in HIV- and HIV+ Individuals (US)
MRM qualification of serum protein biomarkers differentially expressed in Active Tuberculosis in HIV- and HIV+ Individuals (Brazil)
MRM qualifcation of secreted proteins differentially expressed in Brucella-infected macrophage cells vs non-infected macrophage cells
MRM verification of serum protein biomarkers differentially expressed in Active Tuberculosis in HIV- and HIV+ Individuals (All centers - part 1)
Label-sparse (Chang et al. 2014)
Yeast Diauxic Shift (Zampar, el al. 2014)
HPP Chr18: depleted plasma and HepG2 cells, SRM scouting (Ponomarenko et al. 2014)
HPP Chr18: depleted plasma and HepG2 cells, SRM QC (Ponomarenko et al. 2014)
HPP Chr18: depleted plasma and HepG2 cells, SRM BIO (Ponomarenko et al. 2014)
DNA-repair enzymes measure before and after gamma-irradiation of breast cancer-derived cell lines (James, et al.)
Cell-Specific Labeling Enzymes For Analysis of Cell-Cell Communication in Continuous Co-Culture (Tape et al. 2014)
Effects of EGFR, EGFRvIII, PTEN on invasion-promoting proteins secreted by glioblastoma cells (Sangar et al. 2014)
Clinical validation of potential urinary biomarkers of UPJ obstruction in newborns (Lacroix et al.)
Automated Phosphopeptide Enrichment SRM Analysis (Tape, et al.)
SRM analysis of breast tumor samples (Waldemarson, et al)
Biomarkers for cervical cancer. Validation. (Alexander, et al. submitted)
Systematic evaluation of quantotypic peptides for targeted analysis of the human kinome (Worboys, et al.)
Absolute quantification of 7 human AKR proteins in 7 cancer cell lines (Zhang et al. 2013)
Label-free quantification of sentinel proteins, phosphopeptides and degradation products
Automated Absolute and Relative Quantification of SRM Data
Signal transduction reaction monitoring deciphers site-specific PI3K-mTOR/MAPK pathway dynamics
PBMC Proteomic Analysis for the Identification of Biomarkers of Chagasic Cardiomyopathy
Candidate Biomarkers for Invasive Aspergillosis, Verification
Candidate Biomarkers for Invasive Aspergillosis, Qualification 1
Candidate Biomarkers for Invasive Aspergillosis, Qualification 2
Targeted Proteome Pipeline and Assay for 112 Rat Brain Synaptic Proteins, Data Collection
Targeted Proteome Pipeline and Assay for 112 Rat Brain Synaptic Proteins, Assay Development
Extended MRM/SRM experiment for 112 Mouse/Rat Brian Proteins
Human Serum LC-MRM-MS data collected from two cohorts of HCC and cirrhosis patients
Dengue Fever (Brazil) biomarkers - Qualification
Dengue Fever (Brazil) biomarkers - Verification
Helicobacter Pylori-Induced PUD Biomarkers Qualification
Helicobacter Pylori-Induced PUD Biomarkers Verification
Identification of Biomarkers for the Diagnosis of Rickettsial Disease: Qualification
Identification of Biomarkers for the Diagnosis of Rickettsial Disease: Verification
RPD and SID calibration standards for four human plasma peptides in various complex matrices
Targeted proteomic analyses of nasal lavage fluid in persulfate-challenged hairdressers with bleaching powder-associated rhinitis
Study of EphA2 involvement in cancer cells TEM
Mycobacterium tuberculosis Beijing
Mouse Liver Proteins implicated in Metabolism and Type 2 Diabetes.
SWATH Analysis of Yeast Proteome over Time in Response to Osmotic Stress: SRM Dataset
Spike-in dilution series in S. pyogenes cell lysate, (Chawade et al. 2014)
Master Proteome of Chromosome 18 SRM (Poverennaya et al. 2014)
Master Proteome of Chromosome 18 SRM HPL (Poverennaya et al. 2014)
HPP Chr18: liver, 2013
Absolute Quantitification of Yeast proteins by SIL-SRM using the QconCAT technology
Targeted Urine Proteome Assay For Kidney Diseases
Quantitative proteomics of astronaut candidates plasma
Human 18 FDA approved plasma proteins s1
Human 18 FDA approved plasma proteins s2
Human 18 FDA approved plasma proteins s3
SRM quantitative analysis of patients CSF
Identification of human cis-regulatory variation
SRM-based proteomics method to study iron metabolism of Synechocystis sp. PCC 6803
CSNAP is a novel subunit of the COP9 signalosome
DECanBio project: SRM analyses of urine sample from healthy, bladder cancer patients and urological controls
SRM analysis of endogenous Ras isoform abundance in isogenic SW48 cell lines
SRM based analysis of natural genetic variation in C. elegans developmental signalling pathways, 148 proteins
SRM based analysis of natural genetic variation in C. elegans developmental signalling pathways, 44 proteins
SRM based analysis of natural genetic variation in C. elegans developmental signalling pathways, 8 proteins
SRM analysis of human plasma for pancreatic cancer diagnosis
MRM analysis of selected peptides presented on 8 different HLA-B27 allotypes
MRM analysis of serological markers for lung cancer
Targeted Analysis of Phosphorylation Dynamics in Non-small Cell Lung Cancer, QTRAP
Targeted Analysis of Phosphorylation Dynamics in Non-small Cell Lung Cancer, TSQ
Cancer associated proteins in blood plasma: determining normal variation
QconCAT-driven absolute protein quantification of the yeastchaperome under conditions of heat shock, ChapCAT001
QconCAT-driven absolute protein quantification of the yeastchaperome under conditions of heat shock, ChapCAT002
QconCAT-driven absolute protein quantification of the yeastchaperome under conditions of heat shock, ChapCAT003
QconCAT-driven absolute protein quantification of the yeastchaperome under conditions of heat shock, ChapCAT006
QconCAT-driven absolute protein quantification of the yeastchaperome under conditions of heat shock, ChapCAT007
QconCAT-driven absolute protein quantification of the yeastchaperome under conditions of heat shock, ChapCAT008
QconCAT-driven absolute protein quantification of the yeastchaperome under conditions of heat shock, ChapCAT004_HS
QconCAT-driven absolute protein quantification of the yeastchaperome under conditions of heat shock, ChapCAT004_NG
QconCAT-driven absolute protein quantification of the yeastchaperome under conditions of heat shock, ChapCAT005_HS
QconCAT-driven absolute protein quantification of the yeastchaperome under conditions of heat shock, ChapCAT005_NG
Quantification of NuRD complex member upon knockdown of MBD3
Comparison of NuRD stoichiometry in co-elution experiments from HeLa and HEK293 cells
SRM: From Surveying Cell Secretomes to Verifying Urine Proteins (Guo et al., 2016)
Unconventional Endosome-Like Compartment and Retromer Complex (Sangare et al., 2016)
Variant peptide detection utilizing mass spectrometry
Detection of missing proteins using the PRIDE database as a source of mass-spectrometry evidence
Prioritizing Popular Proteins in Liver Cancer. Remodelling of One Carbon Metabolism
Quantification of the Soluble Receptor, (Frank, et al. 2018)
MetAP1MetAP2Quant (Frottin et al. 2016)
PCa_EVs_SRM (Sequeiros et al. 2017)
AFFIRM_in-solution (Sall et al. 2018)
AFFIRM_3bead_to_pg (Sall et al. 2018)
Mouse_MyHC (Peggion et al. 2017)
Urine_AngII_proteins (Konvalinka et al. 2016)
UoL_turnover_SRM (Holman et al. 2016)
SISCAPA-MRM (Hsiao et al. 2017)
TUPA0002 (Williams et al. 2017)
Plasma CFH (Zhang et al. 2017)
Detection of Low Abundance Ocean Bacterial Peptides SRM (Noga et al. 2016)
SRM of geoduck hemolymph peptides to develop biomarkers (Timmins-Schiffman et al. 2017)
SRM of geoduck gonad peptides to develop biomarkers (Timmins-Schiffman et al. 2017)
Proteoform-SRM (Semba et al. 2017)
Absolute quantitation of beta-catenin in immunoprecipitatant and cell lysate (Kitazawa et al. 2017)
SRM analyze for evaluation of CYP1B1 expression (Rolandsson Enes et al. 2017)
DOSCATs (Bennett et al. 2017)
immuno-MRM analysis of a 4 protein based classifier predicting outcome to tamoxifen resistance, QTRAP (De Marchi, et al. 2106)
immuno-MRM analysis of a 4 protein based classifier predicting outcome to tamoxifen resistance, TSQ (De Marchi, et al. 2106)
Differential light-dependent phosphorylation of Ser and Thr residues regulates plant STN7 kinase
Dynamics of protein expression of estrogen receptor alpha signalling in MCF-7 breast cancer cells
Introducing plasma/serum glycodepletion for the targeted proteomics analysis of cytolysis biomarkers
Targeted proteomics of human metapneumovirus in clinical samples and viral cultures
Targeted proteomics of human metapneumovirus in clinical samples and viral cultures, labeled
Measurement of potentially diagnostic organ-specific acute-phase blood protein level changes in early Lyme disease (Zhou et al. 2019)
MRM method for urinary proteins related to respiratory health or for physiological adjustment

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