Gene expression profiling

Latest research

1. A Review on Feature Selection Techniques and its Significance on IoT IDS

   • Supongmen Walling
   • Sibesh Lodh

   in SN Computer Science

   Article 31 October 2025

   

2. Association of astrocyte-specific gene expression in the dorsolateral prefrontal cortex with clozapine treatment in schizophrenia

   • Llucia Prohens
   • Natalia Rodríguez
   • Sergi Mas

   in Translational Psychiatry

   Article Open access 31 October 2025

   

3. Ferroptosis-related differential gene expression and immune correlates in luminal a subtype breast cancer: a prognostic model approach

   • Mei Man
   • Zhenfang Pang
   • Xia Zeng

   in World Journal of Surgical Oncology

   Article Open access 31 October 2025

   

4. Identification of potential biomarkers for Lyme disease using bioinformatics and machine learning

   • Qi-Wen Lan
   • Yao-Zhu Wu
   • Jun-Jie Wang

   in Clinical and Experimental Medicine

   Article Open access 31 October 2025

   

5. Molecular characterization of chronic inflammatory diseases of the urinary bladder based on next-generation RNA sequencing and digital image analysis

   • Yoshiyuki Akiyama
   • Jimpei Miyakawa
   • Daichi Maeda

   in Scientific Reports

   Article Open access 31 October 2025

   

6. Comprehensive proteome profiling of cytochrome P450 isoforms in cancer models

   • Sadr ul Shaheed
   • Ahood A. Al-Eidan
   • Chris W. Sutton

   in Clinical Proteomics

   Article Open access 31 October 2025

   

7. From pixels to cell types: a comprehensive review of computational methods for spatial transcriptomics deconvolution

   • Jahanzeb Saqib
   • Junil Kim

   in Genomics & Informatics

   Article Open access 31 October 2025

   

8. Large-scale causal discovery using interventional data sheds light on gene network structure in k562 cells

   • Brielin C. Brown
   • Alex Tokolyi
   • David A. Knowles

   in Nature Communications

   Article Open access 31 October 2025

   

9. Gene expression signatures from whole blood predict amyotrophic lateral sclerosis case status and survival

   • Yue Zhao
   • Masha G. Savelieff
   • Eva L. Feldman

   in Nature Communications

   Article Open access 31 October 2025

   

10. Natural language processing of gene descriptions for overrepresentation analysis with GeneTEA

    • Isabella A. Boyle
    • Nayeem Akram Aquib
    • Joshua M. Dempster

    in Genome Biology

    Article Open access 30 October 2025

    

11. Identification of metabolic reprogramming-associated biomarkers in endometriosis through integrated bioinformatics analysis

    • Jia Zhen
    • Ziyuan Zhao
    • Li Xu

    in Hereditas

    Article Open access 30 October 2025

    

12. A novel spatial framework to validate arsenic exposure gene expression profiling in bladder cancer using multiplex FISH and AI-powered digital pathology

    • Sonalika Singhal
    • Samarth Singhal
    • Sandeep K. Singhal

    in Scientific Reports

    Article Open access 30 October 2025

    

13. scGSDR: Harnessing gene semantics for single-cell pharmacological profiling

    • Yu-An Huang
    • Xiyue Cao
    • Zhi-An Huang

    in Communications Biology

    Article Open access 29 October 2025

    

14. Transcriptome profiling of uterine leiomyosarcomas identifies a leiomyoma-like expression pattern that indicates better survival

    • Sara Khamaiseh
    • Riitta Koivisto-Korander
    • Pia Vahteristo

    in BJC Reports

    Article Open access 29 October 2025

    

15. A spatial transcriptomics dataset of the endometrium from repeated implantation failure patients

    • Yan Zhang
    • Junlin Pan
    • Peng Wang

    in Scientific Data

    Article Open access 29 October 2025

    

16. SpateCV: cross-modality alignment regularization of cell types improves spatial gene imputation for spatial transcriptomics

    • Jiaqi Yuan
    • Junhua Yu
    • Wenbin Liu

    in Journal of Translational Medicine

    Article Open access 29 October 2025

    

17. BRCAGenie: A machine learning-driven 43-gene polygenic risk score model for precision prediction of breast cancer survival

    • Jia Wei Lee
    • Ashley Jun Wei Lim
    • Caroline G. Lee

    in Journal of Translational Medicine

    Article Open access 29 October 2025

    

18. Comprehensive analysis of metabolic and molecular alterations in the blood of patients with Sjögren’s syndrome based on untargeted metabolomics analysis

    • Jitao Liu
    • Qing Li
    • Mengmeng Xie

    in BMC Medical Genomics

    Article Open access 29 October 2025

    

19. Profylo: A Python Package for Phylogenetic Profile Comparison and Analysis

    • Martin Schoenstein
    • Pauline Mermillod
    • Yannis Nevers

    in Journal of Molecular Evolution

    Article Open access 29 October 2025

    

20. Transcriptomics empower assisted reproductive technology in decoding gamete and embryo development potential: a review

    • Panpan Zhao
    • Xiaomei Tong

    in Journal of Assisted Reproduction and Genetics

    Article 29 October 2025

    

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