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ERROR ~ Error executing process > 'NFCORE_FETCHNGS:SRA:SRA_RUNINFO_TO_FTP (1)'

bugSomething isn't workingSomething isn't working

Status: Open.

#346 In nf-core/fetchngs;

· Luke-ebbis opened on May 12, 2025

Add support for cloud platform

enhancementImprovement for existing functionalityImprovement for existing functionality

Status: Open.

#345 In nf-core/fetchngs;

· Zhenghongc opened on May 8, 2025

Add xsra support

enhancementImprovement for existing functionalityImprovement for existing functionality

Status: Open.

Enhancement

#344 In nf-core/fetchngs;

· edmundmiller opened on May 1, 2025

Partition error on SLURM only with fetchngs -

bugSomething isn't workingSomething isn't working

Status: Open.

#343 In nf-core/fetchngs;

· DollyCM opened on Apr 9, 2025

Fetchngs fails with error: terminated with an error exit status (1) -- Execution is retried (1)

bugSomething isn't workingSomething isn't working

Status: Open.

#342 In nf-core/fetchngs;

· kanekalla opened on Mar 26, 2025

remove partially failed samples from output

enhancementImprovement for existing functionalityImprovement for existing functionality

Status: Open.

#340 In nf-core/fetchngs;

· dmalzl opened on Mar 19, 2025

fetchngs test fails

Status: Open.

#336 In nf-core/fetchngs;

· mjfi2sb3 opened on Feb 6, 2025

fasterq-dump => disk: local-ssd

enhancementImprovement for existing functionalityImprovement for existing functionality

Status: Open.

#332 In nf-core/fetchngs;

· nick-youngblut opened on Jan 11, 2025

Incorrect MD5 checksums being used for some files

bugSomething isn't workingSomething isn't working

Status: Open.

#331 In nf-core/fetchngs;

· tanaes opened on Jan 9, 2025

1.11.0 works while 1.12.0 fails for apptainer+wget ( wget: unable to resolve host address 'ftp.sra.ebi.ac.uk' )

bugSomething isn't workingSomething isn't working

Status: Open.

#328 In nf-core/fetchngs;

· lindenb opened on Dec 9, 2024

Incorrect fastq paths in scRNA-seq sample sheet

bugSomething isn't workingSomething isn't working

Status: Open.

#326 In nf-core/fetchngs;

· huldash opened on Nov 29, 2024

Update some modeles for TES compliance

bugSomething isn't workingSomething isn't working

Status: Open.

#318 In nf-core/fetchngs;

· vsmalladi opened on Sep 13, 2024