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DSL2: <code>test_full</code> nf-test conversion

DSL2

Status: Open.

#1141 In nf-core/eager;

· TCLamnidis opened on May 2, 2025

DSL2: <code>test_humanpopgen</code> nf-test conversion

DSL2

Status: Open.

#1140 In nf-core/eager;

· TCLamnidis opened on May 2, 2025

DSL2: <code>test_long</code> nf-test conversion

DSL2

Status: Open.

#1139 In nf-core/eager;

· TCLamnidis opened on May 2, 2025

DSL2: <code>test_microbial</code> nf-test conversion

DSL2

Status: Open.

#1138 In nf-core/eager;

· TCLamnidis opened on May 2, 2025

DSL2: <code>test_minimal</code> nf-test conversion

DSL2

Status: Open.

#1137 In nf-core/eager;

· TCLamnidis opened on May 2, 2025

DSL2: <code>test_modern</code> nf-test conversion

DSL2

Status: Open.

#1136 In nf-core/eager;

· TCLamnidis opened on May 2, 2025

DSL2: <code>test_shortdna</code> nf-test conversion

DSL2

Status: Open.

#1135 In nf-core/eager;

· TCLamnidis opened on May 2, 2025

Variation graph mapping

enhancementNew feature or requestNew feature or request

Status: Open.

#1132 In nf-core/eager;

· mattiassherman opened on Apr 14, 2025

DSL2 - Host-removal keeps adapters in [DISCUSSION?]

DSL2

Status: Open.

#1131 In nf-core/eager;

· merszym opened on Apr 11, 2025

 ·  

3.0 Augsburg

DSL2 remove or change bamfiltering_genomicbamfilterflag

bugSomething isn't workingSomething isn't working

DSL2

Status: Open.

#1130 In nf-core/eager;

· merszym opened on Apr 11, 2025

 ·  

3.0 Augsburg

DSL2 - Genotyping on unmerged libraries

DSL2

enhancementNew feature or requestNew feature or request

Status: Open.

#1128 In nf-core/eager;

· ilight1542 opened on Mar 26, 2025

[test data] Human aligned bam testdataset still has SQ tags for non-existant fasta indices in corresponding fasta used

bugSomething isn't workingSomething isn't working

needs upstream fixNeeds a fix in the upstream tool projectNeeds a fix in the upstream tool project

Status: Open.

#1127 In nf-core/eager;

· ilight1542 opened on Mar 26, 2025