Table 4 Type I Error Rates Estimates at in Scenario 2
From: Meta-Qtest: meta-analysis of quadratic test for rare variants
α | Hom-meta-Q1 | Het-meta-Q1 | Hom-meta-Q2 | Het-meta-Q2 | Hom-meta-Q3 | Het-meta-Q3 | Hom-meta-SKAT | Het-meta-SKAT | Hom-meta-SKAT-O | Het-meta-SKAT-O |
|---|---|---|---|---|---|---|---|---|---|---|
10−2 | 1.08E-02 | 9.90E-03 | 1.05E-02 | 9.80E-03 | 9.80E-03 | 1.00E-02 | 9.80E-03 | 1.03E-02 | 9.80E-03 | 1.04E-02 |
10−3 | 1.40E-03 | 9.00E-04 | 1.40E-03 | 1.10E-03 | 9.00E-04 | 1.10E-03 | 1.00E-03 | 9.00E-04 | 1.10E-03 | 1.20E-03 |