taxonkit

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A Practical and Efficient NCBI Taxonomy Toolkit, also supports creating NCBI-style taxdump files for custom taxonomies like GTDB/ICTV

bioinformatics cross-platform taxonomy taxid lca lineage taxdump taxonkit

GTDB taxonomy taxdump files with trackable TaxIds

bioinformatics taxonomy taxid taxdump gtdb taxonkit

NCBI-style taxdump files for International Committee on Taxonomy of Viruses (ICTV)

taxid taxdump ictv taxonkit

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