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bam2bed fails to split correctly + request support for extended cigar operations

#291

· koriege opened

on Nov 14, 2025

bam2bed-megarow/float128 in linux binary build do not pass choice through to convert2bed

#290

· mattmaurano opened

on Nov 3, 2025

[BEDOPS 2.4.42] error-check tests succeed unexpectedly

#289

· behnle opened

on Aug 22, 2025

unstarch --verify-signature fails on some files with header

#272

· vulpescu opened

on Aug 31, 2022

Bedmap fails with gzipped starch archives

#271

· vulpescu opened

on Jul 26, 2022

Investigate order of application of <code>--ec</code> with <code>--chrom</code> in <code>bedops</code>

feature request

#257

· alexpreynolds opened

on Jun 16, 2021

Investigate having <code>--min</code>/<code>--max</code>/etc. operators support <code>--echo-*</code> with <code>--prec N</code>

feature request

#250

· alexpreynolds opened

on Mar 10, 2021

--prec does not affect reference file score column when run as bedmap [ref file]

#219

· mattmaurano opened

on Mar 6, 2019

Count gave me weird result

feature request

#213

· demis001 opened

on Nov 30, 2018

[Feature Request]: Option to select specific column in bedmap

#205

· alexlenail opened

on Feb 27, 2018

bedops hangs if passed a directory

#200

· sjneph opened

on Oct 3, 2017

tests for bedops with starch

#182

· sjneph opened

on Jun 20, 2017