Commits

Branch selector

 master

User selector

All users

All time

Commit History

Commits on Mar 1, 2024

• update bam index search

  Schaudge

  committed
  9ba24aa

  Copy full SHA for 9ba24aa

• update bam index search

  Schaudge

  committed
  ba9ea0a

  Copy full SHA for ba9ea0a

Commits on Feb 23, 2024

• v1.0.0 rc

  Schaudge

  committed
  51deab3

  Copy full SHA for 51deab3

• v1.0.0 rc

  Schaudge

  committed
  fcacf02

  Copy full SHA for fcacf02

• v1.0.0 rc

  Schaudge

  committed
  cc87512

  Copy full SHA for cc87512

• update compat. grailbase

  Schaudge

  committed
  cff4bfc

  Copy full SHA for cff4bfc

• context io

  Schaudge

  committed
  440cdb8

  Copy full SHA for 440cdb8

Commits on Feb 22, 2024

• update

  Schaudge

  committed
  dbb4565

  Copy full SHA for dbb4565

• module latest

  Schaudge

  committed
  f1072bf

  Copy full SHA for f1072bf

Commits on Feb 21, 2024

• v0.0.1 rc

  Schaudge

  committed
  d41b7b1

  Copy full SHA for d41b7b1

• hts dependency change

  Schaudge

  committed
  53bf698

  Copy full SHA for 53bf698

• hts dependency change

  Schaudge

  committed
  4d6b029

  Copy full SHA for 4d6b029

• refactor module naming

  Schaudge

  committed
  67c7698

  Copy full SHA for 67c7698

• Update go.mod

  Schaudge

  authored
  05d7f9a

  Copy full SHA for 05d7f9a

Commits on Aug 18, 2020

• Update go.mod

  Show description for d966d87
  yipal

  committed
  d966d87

  Copy full SHA for d966d87

Commits on Aug 17, 2020

• cmd/bio-bam-sort: fix bio-bam-sort -sam documentation

  Show description for aeac8f7
  

  demetrin

  authored and

  Alexander Yip

  committed
  aeac8f7

  Copy full SHA for aeac8f7

• encoding/bam: add sharded bam reader for adjacent record pairs

  Show description for eb33ecf
  

  demetrin

  authored and

  Alexander Yip

  committed
  eb33ecf

  Copy full SHA for eb33ecf

• bio/pileup: fixit: LoadFa update

  Show description for 8596d41
  

  Christopher Chang

  authored and

  Alexander Yip

  committed
  8596d41

  Copy full SHA for 8596d41

• bio/encoding/fasta: fixit: add support for BAM-friendly fasta load

  Show description for 511e4bd
  

  Christopher Chang

  authored and

  Alexander Yip

  committed
  511e4bd

  Copy full SHA for 511e4bd

• bio/encoding/bamprovider: deterministic BoundedPairIterator

  Show description for 4d67c1a
  

  Christopher Chang

  authored and

  Alexander Yip

  committed
  4d67c1a

  Copy full SHA for 4d67c1a

• bio/encoding/bam: fix gbai byte-based sharding

  Show description for 30936ae
  

  Christopher Chang

  authored and

  Alexander Yip

  committed
  30936ae

  Copy full SHA for 30936ae

• bio/spamtools/pileup: deduplicate open-sourced code

  Show description for c8261db
  

  Christopher Chang

  authored and

  Alexander Yip

  committed
  c8261db

  Copy full SHA for c8261db

• fragments: allow optional larger field read buffers

  Show description for 183e47e
  

  josh-newman

  authored and

  Alexander Yip

  committed
  183e47e

  Copy full SHA for 183e47e

Commits on May 2, 2020

• bio/pileup: migrate everything else

  Show description for 5fd533b
  

  Christopher Chang

  committed
  5fd533b

  Copy full SHA for 5fd533b

• cmd/bio-pileup: command-line parsing skeleton

  Show description for 60856b7
  

  Christopher Chang

  committed
  60856b7

  Copy full SHA for 60856b7

• pileupsnp: fix misuse of OverlapByID

  Show description for 5d2430c
  

  Christopher Chang

  committed
  5d2430c

  Copy full SHA for 5d2430c

• bio/encoding/bamprovider: prohibit Split*Coords + nonzero Padding

  Show description for 5f6d17e
  

  Christopher Chang

  committed
  5f6d17e

  Copy full SHA for 5f6d17e

• go: add onnx module, update gogo/protobuf and dependencies

  Show description for 0d91546
  

  Senthil Krishnamurthy

  authored and

  Christopher Chang

  committed
  0d91546

  Copy full SHA for 0d91546

• bio/encoding/fasta: introduce eager indexed reader

  Show description for 24f532a
  

  josh-newman

  authored and

  Christopher Chang

  committed
  24f532a

  Copy full SHA for 24f532a

• bio/encoding/fasta: add optional sequence cleaning

  Show description for 447216d
  

  josh-newman

  authored and

  Christopher Chang

  committed
  447216d

  Copy full SHA for 447216d

• bio/encoding/fasta: refactor

  Show description for defe8d0
  

  josh-newman

  authored and

  Christopher Chang

  committed
  defe8d0

  Copy full SHA for defe8d0

Commits on Mar 3, 2020

• Update grailbio/hts in go.mod

  

  Siddhartha Bagaria

  committed
  942f7ee

  Copy full SHA for 942f7ee

• fragments: fix cgo vanadium runtime dependency

  Show description for 60bea17
  

  josh-newman

  authored and

  Siddhartha Bagaria

  committed
  60bea17

  Copy full SHA for 60bea17

• github.com/grailbio/bio: work around import error

  Show description for 38273fb
  

  josh-newman

  authored and

  Siddhartha Bagaria

  committed
  38273fb

  Copy full SHA for 38273fb

• go/bio/util/distance: use sync.Pool to manage matrices in Levenshtein

  Show description for 0393c1f
  

  Jonathan Toung

  authored and

  Siddhartha Bagaria

  committed
  0393c1f

  Copy full SHA for 0393c1f

Pagination

Previous

Next