apparently QUAST doesn't like GFF headers with too much information and complains about the missing seq ID (last commented line).
##gff-version 3
##feature-ontology https://github.com/The-Sequence-Ontology/SO-Ontologies/blob/v3.1/so.obo
# organism salmonella enterica gallinarum
# Annotated with Bakta
# Software: v1.9.4
# Database: v5.1, light
# DOI: 10.1099/mgen.0.000685
# URL: github.com/oschwengers/bakta
##sequence-region chromosome00001 1 4698102
strangely not a problem with the test data set