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Pull requests: MultiQC/MultiQC

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Pull requests list

fix(cellranger_arc): prevent key collisions between ATAC and GEX metrics
#3480 opened Feb 4, 2026 by yunhailuo Loading…
2 of 8 tasks
Update methurator module
#3479 opened Jan 30, 2026 by edogiuili Loading…
Add % surviving bases to fastp
#3472 opened Jan 16, 2026 by schorlton-bugseq Loading…
better header k/v spacing
#3471 opened Jan 14, 2026 by jchorl Loading…
1 task done
add spacing between ai summary and general stats
#3470 opened Jan 14, 2026 by jchorl Loading…
1 task done
Support different mime types for custom images, support custom favicon
#3469 opened Jan 13, 2026 by jchorl Loading…
1 task done
3
claude/switch-to-ty-checker-7Ve9I
#3468 opened Jan 13, 2026 by ewels Loading…
2
New module: riboWaltz
#3465 opened Jan 13, 2026 by pinin4fjords Loading…
1
Add project-level metrics for Bases2Fastq
#3460 opened Jan 8, 2026 by caruizelembioinfo Loading…
1
Fix custom_plot_config parsing for y_bands/x_bands/x_lines/y_lines bug: core Bug in the main MultiQC code
#3459 opened Dec 22, 2025 by ewels Loading… v1.34
1
1
Add new module: RiboDetector
#3452 opened Dec 19, 2025 by pinin4fjords Loading…
4 tasks done
1
catch unexpected bedrock response shapes and log
#3440 opened Dec 16, 2025 by jchorl Loading…
[nonpareil][adapter removal] Add missing anchors
#3429 opened Dec 9, 2025 by fgvieira Loading…
1 task done
2
Add SAV (Sequencing Analysis Viewer) module
#3425 opened Dec 8, 2025 by pinin4fjords • Draft
2 of 4 tasks
1
1
Add toggle to display line graphs as heatmaps core: front end WIP Work in progress
#3424 opened Dec 8, 2025 by ewels • Draft
1
2
Refactor bbtools module to follow MultiQC conventions module: change
#3410 opened Dec 3, 2025 by ewels Loading…
2
New Module : wittyer (a tool for benchmarking structural variant (SV) calls against a truth set)
#3408 opened Dec 2, 2025 by georgiakes Loading…
7 of 8 tasks
1
4
[fastqc] switch adapter content plot into several subplots module: change waiting: response Waiting for more information from user
#3407 opened Dec 2, 2025 by fgvieira Loading…
1 task done
8
feat: add fasterp module module: new
#3392 opened Nov 24, 2025 by drbh Loading…
4
feat: migrate to uv for faster dependency management
#3388 opened Nov 14, 2025 by edmundmiller • Draft
[work in progress] docs redesign documentation WIP Work in progress
#3383 opened Nov 6, 2025 by dana-seqera • Draft
feat: Add Claude Code skills system for automated module development
#3378 opened Oct 28, 2025 by edmundmiller • Draft
Add new module: Deacon
#3337 opened Sep 8, 2025 by arthurosch Loading…
8 tasks done
1
Add support for umi_tools whitelist and count commands
#3326 opened Sep 2, 2025 by edmundmiller • Draft
1
Add automated module generation system
#3325 opened Sep 2, 2025 by edmundmiller • Draft
9
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